Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015931872.1_cds_XP_016478531.1_70162
CDS Infomation

[gene=LOC107799906] [db_xref=GeneID:107799906] [protein=probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9] [exception=annotated by transcript or proteomic data] [protein_id=XP_016478531.1] [location=join(149789..151770,151934..>152093)] [gbkey=CDS]
Sequence

ATGGCATCAAGATCTTGTGCAAACTTTTTTGACTTGGCATCTGTGGAGATACTGGATATA
CCTCAGATTCCTAGAGCTCTTCCCCGGGTGATGACTGTTCCTGGAATCATCGCTGGTGGT
TATGGAAGCAATGATGGGGATTCAGATAGTATAACATCTGCTTGTCATGAGCGAAAAATT
ATTGTTGCTAACATGCTGCCTTTGCATGCTCAAAGGGATACAGCAGCTGAAAAGTGGTGC
TTTAGTTTGGATGAGGATTCTCTTTTATTGCAACTGAAGGATGGCTTTTCACCTGAAACT
GAGGTTATCTATGTGGGTTCTCTCAAGGTTGATGTGGAACTGAGTGAACAGGAGGAAGTT
ACACAGAGACTACTTGAGGAGTTCAAGTGTGTGCCTACCTATGTACCTCGTGACATCCAG
GAGAAATTTTATCATGGCTTCTGTAAGCAACAATTATGGCCACTTTTTCACTACATGCTT
CCCATGTGCCCAGATCATGGAGATCGTTTTGATCGTCAGCTCTGGCAAGCTTATGTCTCA
GCAAATAAGCTATTTGCTGATAAGGTTATGGAAGTGGTCAATCCCGAGGATGATTACATA
TGGGTTCAAGATTACCACCTCATGGTTCTTCCAACATTTTTAAGAAAGCGATACCATCGA
GTGAAGCTTGGGTTTTTTCTTCATAGCCCATTTCCATCATCAGAAATTTACCGAACTCTC
CCAGTTAGGGATGAAATTCTAAAAGGATTGTTGAACTGCGACCTGATTGGATTTCATACA
TTTGATTATGCGCGTCACTTTCTGTCGTGCTGCAGTAGAATGCTAGGTCTAGATTATGAA
TCTAAACGAGGACACATTGGACTTGATTACTTTGGTCGTACAGTTTACATAAAAATTCTG
CCAGTAGGAATACATAAGGGTCGACTGGAGTTGGTGTTAAATCTTTCTTCTACATTTGCT
AAAGCTAAAGAAGTTCAAGAACAGTTCAAGGGAATGAAAGTCATTCTTGGTGTGGATGAT
ATGGACATCTTTAAAGGTATTAGTTTGAAATTACTAGCTTTTGAACACCTACTACAGCAG
CATGAGGATTTGCAGGGTAAACTTGTCCTTGTCCAAATAGTAAATCCTGCTCGTAGCTCT
GGGAAAGATGTCCAGGAAGCTAAGAGGGAGGCATATTTGACTGTTGACAGGATCAATCAA
ATTTATGGAAGATCTAATTATGAGCCTGTAATTTTGATTGATCGTCCAGTTGCTCGCTAT
GAGAAGACTGCATATTATGCTGTTGCTGATTGTTGCATAGTCAATGCTGTGAGGGATGGG
ATGAATTTAGTGCCTTACAAGTATATTGTCTGTAGGCAGGGTTCTCTTGGTATGGATGAG
GCTATGGGTATCAAAGCTGATTCTCTTAGAACTAGCATGCTTGTTGTGTCAGAATTTATT
GGTTGTTCACCATCATTGAGTGGAGCAATTAGGGTAAATCCATGGGATATTGAGGCTGTC
GCTGAGGCTTTAAATGTGGCCATCACAATGTCGGATTCTGAGAAAGTGCTTCGTCACGAG
AAGCATTACCGCTATGTTAGCTCTCATGATGTAGCTTATTGGGCCCGTAGCTTCATGCAG
GATTTGGAGAGAGCATGCAAAGATCATTACAGTAAGCGATGTTGGGGCATTGGTCTTGGC
CTAGGTTTCAGAGTCATCGCACTTTCGCCAAGTTTTAGAAAGTTGTCCATAGATCACATT
GTTTCCTCATATAGGAGGACACAGAGAAGGGCGATATTTTTGGACTATGATGGTACTGTC
GTACCTCAGTCATCTATGGTTAAAGCTCCAAGTGCCGAAGTTATTACACTGTTGAACACT
CTAAGCAATGACCCTAAAAACACTGTGTATATTGTTAGTGGCAGAGGAAGGACCTCATTA
AGCGAATGGCTTGCTCCATGTGAAAGGCTTGGAATAGCTGCTGAACATGGATACTTCATA
AGGGAGAGTAAAACCTCTGATTGGGAATCTTTGGCTTCTGATCTTGAATGGAACGAAATT
GTGGAACCTGTGATGAAACTTTACAGGGAAGCAACTGACGGATCATATATAGAAACTAAA
GAGAGTGCATTAGTGTGGCACCATCATGATGCAGACCCTGAC

Peptide Sequence

PEP ID

XP_016478531.1
PEP Infomation

PREDICTED: probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 [Nicotiana tabacum]
Sequence

MASRSCANFFDLASVEILDIPQIPRALPRVMTVPGIIAGGYGSNDGDSDSITSACHERKI
IVANMLPLHAQRDTAAEKWCFSLDEDSLLLQLKDGFSPETEVIYVGSLKVDVELSEQEEV
TQRLLEEFKCVPTYVPRDIQEKFYHGFCKQQLWPLFHYMLPMCPDHGDRFDRQLWQAYVS
ANKLFADKVMEVVNPEDDYIWVQDYHLMVLPTFLRKRYHRVKLGFFLHSPFPSSEIYRTL
PVRDEILKGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKIL
PVGIHKGRLELVLNLSSTFAKAKEVQEQFKGMKVILGVDDMDIFKGISLKLLAFEHLLQQ
HEDLQGKLVLVQIVNPARSSGKDVQEAKREAYLTVDRINQIYGRSNYEPVILIDRPVARY
EKTAYYAVADCCIVNAVRDGMNLVPYKYIVCRQGSLGMDEAMGIKADSLRTSMLVVSEFI
GCSPSLSGAIRVNPWDIEAVAEALNVAITMSDSEKVLRHEKHYRYVSSHDVAYWARSFMQ
DLERACKDHYSKRCWGIGLGLGFRVIALSPSFRKLSIDHIVSSYRRTQRRAIFLDYDGTV
VPQSSMVKAPSAEVITLLNTLSNDPKNTVYIVSGRGRTSLSEWLAPCERLGIAAEHGYFI
RESKTSDWESLASDLEWNEIVEPVMKLYREATDGSYIETKESALVWHHHDADPDFGSCQA
KELLDHLESVLANEPAVVKRGQHIVEIKPQGVTKGIVAEKVLSMMVDSGNPPDFVMCIGD
DRSDEDMFESILSTVSSPSVTAAPDIFACTVGQKPSKAKYYLDDTADVLRLLRGLANASC
PKPRHTAQFQVAFDSVL

Transcript Sequence

Gene sequence data has not been registered.